{
  "_id": "6a102db8acfb0bcc41c93ebf",
  "Package": "clmstan",
  "Type": "Package",
  "Title": "Cumulative Link Models with 'CmdStanR'",
  "Version": "0.1.1",
  "Authors@R": "person(\"Tomotaka\", \"Momozaki\",\nemail = \"momozaki.stat@gmail.com\",\nrole = c(\"aut\", \"cre\"))",
  "Author": "Tomotaka Momozaki [aut, cre]",
  "Maintainer": "Tomotaka Momozaki <momozaki.stat@gmail.com>",
  "Description": "Fits cumulative link models (CLMs) for ordinal categorical\ndata using 'CmdStanR'. Supports various link functions\nincluding logit, probit, cloglog, loglog, cauchit, and flexible\nparametric links such as Generalized Extreme Value (GEV),\nAsymmetric Exponential Power (AEP), and Symmetric Power. Models\nare pre-compiled using the 'instantiate' package for fast\nexecution without runtime compilation. Methods are described in\nAgresti (2010, ISBN:978-0-470-08289-8), Wang and Dey (2011)\n<doi:10.1007/s10651-010-0154-8>, and Naranjo, Perez, and Martin\n(2015) <doi:10.1007/s11222-014-9449-1>.",
  "License": "MIT + file LICENSE",
  "URL": "https://t-momozaki.github.io/clmstan/,\nhttps://github.com/t-momozaki/clmstan",
  "BugReports": "https://github.com/t-momozaki/clmstan/issues",
  "Additional_repositories": "https://stan-dev.r-universe.dev",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev",
  "Repository": "https://t-momozaki.r-universe.dev",
  "Date/Publication": "2026-02-11 23:42:33 UTC",
  "RemoteUrl": "https://github.com/t-momozaki/clmstan",
  "RemoteRef": "HEAD",
  "RemoteSha": "81ff4f2a2e74d3c47401cedd603587f49083c235",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-13 05:42:44 UTC",
    "User": "root"
  },
  "MD5sum": "6e34cf58b8e1a9645e063f4809f59087",
  "_user": "t-momozaki",
  "_type": "src",
  "_file": "clmstan_0.1.1.tar.gz",
  "_fileid": "ca31b13c6306d47ff803415dae8c1d5932bee7793833ad2bb69b9f50b130963c",
  "_filesize": 276325,
  "_sha256": "ca31b13c6306d47ff803415dae8c1d5932bee7793833ad2bb69b9f50b130963c",
  "_created": "2026-05-13T05:42:44.000Z",
  "_published": "2026-05-22T10:19:36.522Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77360326716,
      "time": 170,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "6962526372"
    },
    {
      "job": 77360326918,
      "time": 168,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "6962525922"
    },
    {
      "job": 77360326944,
      "time": 171,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "6962526607"
    },
    {
      "job": 77360326907,
      "time": 189,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "6962531625"
    },
    {
      "job": 77360326991,
      "time": 174,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "6962527119"
    },
    {
      "job": 77360326817,
      "time": 259,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "6962546490"
    },
    {
      "job": 77360327340,
      "time": 128,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "6962516862"
    },
    {
      "job": 77360326868,
      "time": 223,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "6962538729"
    },
    {
      "job": 77360326423,
      "time": 441,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6962489698"
    },
    {
      "job": 77360326212,
      "time": 161,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7158191306"
    },
    {
      "job": 77360326792,
      "time": 105,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "6962512022"
    },
    {
      "job": 77360327261,
      "time": 147,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "6962521280"
    },
    {
      "job": 77360326984,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "6962510642"
    }
  ],
  "_buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/t-momozaki/clmstan",
  "_commit": {
    "id": "81ff4f2a2e74d3c47401cedd603587f49083c235",
    "author": "Tomotaka <momozaki.stat@gmail.com>",
    "committer": "Tomotaka <momozaki.stat@gmail.com>",
    "message": "Fix CRAN maintainer feedback: suppress install error message\n\nAddress Brian D. Ripley's feedback (2026-02-12):\n- Add requireNamespace guard in install.libs.R to prevent misleading\n  \"Error: The package cmdstanr is required\" message during installation\n  when cmdstanr is not available\n- Remove SystemRequirements: CmdStan from DESCRIPTION (not required\n  to install or check the package)\n- Bump version to 0.1.1\n",
    "time": 1770853353
  },
  "_maintainer": {
    "name": "Tomotaka Momozaki",
    "email": "momozaki.stat@gmail.com",
    "login": "t-momozaki",
    "uuid": 121425798
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0.0",
      "role": "Depends"
    },
    {
      "package": "instantiate",
      "role": "Imports"
    },
    {
      "package": "posterior",
      "role": "Imports"
    },
    {
      "package": "bayesplot",
      "role": "Imports"
    },
    {
      "package": "loo",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "ordinal",
      "role": "Suggests"
    },
    {
      "package": "cmdstanr",
      "version": ">= 0.9.0",
      "role": "Suggests"
    }
  ],
  "_owner": "t-momozaki",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-06",
      "n": 13
    },
    {
      "week": "2026-07",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "t-momozaki",
      "count": 14,
      "uuid": 121425798
    }
  ],
  "_userbio": {
    "uuid": 121425798,
    "type": "user",
    "name": "Tomotaka Momozaki"
  },
  "_downloads": {
    "count": 174,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/clmstan"
  },
  "_devurl": "https://github.com/t-momozaki/clmstan",
  "_pkgdown": "https://t-momozaki.github.io/clmstan/",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/clmstan.html",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/t-momozaki/clmstan",
  "_realowner": "t-momozaki",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2026-02-16"
    },
    {
      "version": "0.1.1",
      "date": "2026-02-16"
    }
  ],
  "_exports": [
    "cauchy",
    "clm_prior",
    "clm_stan",
    "diagnostics",
    "extract_acf",
    "flat",
    "gamma",
    "is.clmstan",
    "normal",
    "posterior_predict.clmstan",
    "prior",
    "student_t",
    "supported_links",
    "supported_thresholds"
  ],
  "_help": [
    {
      "page": "c.clm_prior_spec",
      "title": "Combine Multiple Prior Specifications",
      "topics": [
        "c.clm_prior_spec"
      ]
    },
    {
      "page": "cauchy",
      "title": "Cauchy Distribution for Prior Specification",
      "topics": [
        "cauchy"
      ]
    },
    {
      "page": "clm_prior",
      "title": "Prior Specification for clmstan",
      "topics": [
        "clm_prior"
      ]
    },
    {
      "page": "clm_stan",
      "title": "Fit a Cumulative Link Model using CmdStanR",
      "topics": [
        "clm_stan"
      ]
    },
    {
      "page": "clmstan-class",
      "title": "clmstan S3 Class",
      "concept": [
        "clmstan methods"
      ],
      "topics": [
        "clmstan-class"
      ]
    },
    {
      "page": "coef.clmstan",
      "title": "Extract coefficients from clmstan objects",
      "topics": [
        "coef.clmstan"
      ]
    },
    {
      "page": "diagnostics",
      "title": "MCMC Diagnostics for clmstan objects",
      "topics": [
        "diagnostics",
        "diagnostics.clmstan"
      ]
    },
    {
      "page": "extract_acf",
      "title": "Extract ACF values from clmstan object",
      "topics": [
        "extract_acf"
      ]
    },
    {
      "page": "fitted.clmstan",
      "title": "Fitted values for clmstan objects",
      "topics": [
        "fitted.clmstan"
      ]
    },
    {
      "page": "flat",
      "title": "Flat (Improper Uniform) Prior Distribution",
      "topics": [
        "flat"
      ]
    },
    {
      "page": "gamma",
      "title": "Gamma Distribution for Prior Specification",
      "topics": [
        "gamma"
      ]
    },
    {
      "page": "is.clmstan",
      "title": "Check if object is clmstan",
      "topics": [
        "is.clmstan"
      ]
    },
    {
      "page": "link_functions",
      "title": "Available Link Functions",
      "concept": [
        "link functions"
      ],
      "topics": [
        "link_functions"
      ]
    },
    {
      "page": "loo.clmstan",
      "title": "Leave-One-Out Cross-Validation for clmstan objects",
      "topics": [
        "loo.clmstan"
      ]
    },
    {
      "page": "normal",
      "title": "Normal Distribution for Prior Specification",
      "topics": [
        "normal"
      ]
    },
    {
      "page": "plot.clmstan",
      "title": "Plot method for clmstan objects",
      "topics": [
        "plot.clmstan"
      ]
    },
    {
      "page": "posterior_predict.clmstan",
      "title": "Posterior predictive distribution for clmstan objects",
      "topics": [
        "posterior_predict.clmstan"
      ]
    },
    {
      "page": "predict.clmstan",
      "title": "Predict method for clmstan objects",
      "topics": [
        "predict.clmstan"
      ]
    },
    {
      "page": "print.clm_dist",
      "title": "Print method for clm_dist objects",
      "topics": [
        "print.clm_dist"
      ]
    },
    {
      "page": "print.clm_prior",
      "title": "Print method for clm_prior objects",
      "topics": [
        "print.clm_prior"
      ]
    },
    {
      "page": "print.clm_prior_list",
      "title": "Print method for clm_prior_list objects",
      "topics": [
        "print.clm_prior_list"
      ]
    },
    {
      "page": "print.clm_prior_spec",
      "title": "Print method for clm_prior_spec objects",
      "topics": [
        "print.clm_prior_spec"
      ]
    },
    {
      "page": "print.clmstan",
      "title": "Print method for clmstan objects",
      "topics": [
        "print.clmstan"
      ]
    },
    {
      "page": "print.summary.clmstan",
      "title": "Print method for summary.clmstan objects",
      "topics": [
        "print.summary.clmstan"
      ]
    },
    {
      "page": "prior",
      "title": "Specify Prior Distributions",
      "topics": [
        "prior"
      ]
    },
    {
      "page": "student_t",
      "title": "Student-t Distribution for Prior Specification",
      "topics": [
        "student_t"
      ]
    },
    {
      "page": "summary.clmstan",
      "title": "Summary method for clmstan objects",
      "topics": [
        "summary.clmstan"
      ]
    },
    {
      "page": "supported_links",
      "title": "Get supported link functions",
      "topics": [
        "supported_links"
      ]
    },
    {
      "page": "supported_thresholds",
      "title": "Get supported threshold structures",
      "topics": [
        "supported_thresholds"
      ]
    },
    {
      "page": "waic.clmstan",
      "title": "Widely Applicable Information Criterion for clmstan objects",
      "topics": [
        "waic.clmstan"
      ]
    }
  ],
  "_readme": "https://github.com/t-momozaki/clmstan/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "backports",
    "bayesplot",
    "callr",
    "checkmate",
    "cli",
    "cpp11",
    "distributional",
    "dplyr",
    "farver",
    "fs",
    "generics",
    "ggplot2",
    "ggridges",
    "glue",
    "gtable",
    "instantiate",
    "isoband",
    "labeling",
    "lifecycle",
    "loo",
    "magrittr",
    "matrixStats",
    "numDeriv",
    "pillar",
    "pkgconfig",
    "plyr",
    "posterior",
    "processx",
    "ps",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "reshape2",
    "rlang",
    "S7",
    "scales",
    "stringi",
    "stringr",
    "tensorA",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "getting-started.Rmd",
      "filename": "getting-started.html",
      "title": "Getting Started with clmstan",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Comparison with ordinal::clm()",
        "Installation",
        "Quick Start",
        "For ordinal::clm() Users",
        "API Correspondence",
        "Example Comparison",
        "Key Differences",
        "Link Functions",
        "Standard Links (5)",
        "Flexible Links (6)",
        "Link Function Summary",
        "Threshold Structures",
        "Flexible (Default)",
        "Equidistant",
        "Symmetric",
        "Prior Specification",
        "Default Priors",
        "Using prior() Function (Recommended)",
        "Available Distributions",
        "Prior Classes",
        "Legacy API (clm_prior)",
        "Interpreting Results",
        "Basic Methods",
        "Diagnostic Plots",
        "Convergence Diagnostics",
        "Prediction",
        "Category Prediction",
        "Probability Prediction",
        "Posterior Predictive Distribution",
        "Model Comparison",
        "Practical Workflow",
        "Troubleshooting",
        "CmdStan Not Found",
        "Convergence Issues",
        "Divergent Transitions",
        "Memory Issues",
        "References and Resources",
        "Package Resources",
        "Related Packages",
        "Statistical References"
      ],
      "created": "2026-02-02 08:44:24",
      "modified": "2026-02-02 23:41:32",
      "commits": 2
    }
  ],
  "_score": 4,
  "_indexed": true,
  "_nocasepkg": "clmstan",
  "_universes": [
    "t-momozaki"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:05.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "20f1b62b45979c1b7905830a5ee20daf0c35ba4029e3e9b08766af825c56e26c",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:00.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "8786139a4cc9097dceb0fa4052183cea21ca4f0fe65515d28d788a0cf275ed33",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:06.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "4caa01c5fc2d91394391480b18ddfb326d33e9ce830640c325358a808c4aff16",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:22.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "3f6d4f93d382789f383cf6b2f5edfef43242c0e9d5207941df8191fb589f848a",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:10.000Z",
      "arch": "aarch64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "253f046c7d0e8d101b41e4ddd3ee59a658a75ce4269037fef11435d11ddd3391",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-13T05:48:22.000Z",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "09b0846b3c7a80f80413dd740773cf2aa8715b5303f06e39f2ee45df1488ba96",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-13T05:46:23.000Z",
      "arch": "aarch64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "9fc6d44581569a4f4adf4992eb6c112e6b521a7bfa396e0990a7e83bef54ecc8",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-13T05:47:49.000Z",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "d32dfaa4c48038345e4b78e21878aafd267c56ee166a69676d99535f3646296e",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-13T05:45:46.000Z",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "faaf92d5291cee9d8cbd4929aa6df9a77c61aea9d7797ffba9ac35b2bc23292d",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-13T05:46:11.000Z",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "f66eb6698ebc46d629a6594f1b7fb2ba805b3bdc8ad5ffd4798a985fa378788c",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-13T05:45:36.000Z",
      "arch": "x86_64",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "c9d638aa4c7e2ea174b739b3eed25de310b8d33480e9dd029396cd45c5ce63dc",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-05-22T10:19:12.000Z",
      "arch": "emscripten",
      "commit": "81ff4f2a2e74d3c47401cedd603587f49083c235",
      "fileid": "28dd549cd09bd646cf5f427b57335928200a262fe459961cff1ffe8c3e198532",
      "status": "success",
      "buildurl": "https://github.com/r-universe/t-momozaki/actions/runs/25780569198"
    }
  ]
}